The Legend of Heroes III begins the story with childhood friends Jurio and Chris as they embark on a pilgrimage to five shrines surrounding their village. During their journey, they learn of the dangers of the Raual Wave that threatens to destroy everything in its path. Can Jurio and Chris, with the help of their friends, stop the Raual Wave emanating from Queen Isabella's castle? Will they discover the identity of the mysterios "Moonlight Witch" who predicted it all?